rs6000847 chr22:37626615 A>C

Sequence
atgaagagcagatacgttagggcc[A/C]catcaaaggaatcctcagggatat
ASB in cell types
SEM (childhood B acute lymphoblastic leukemia)
ASB for transcription factors
ERG_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ERG_HUMAN 2.44 -4.32 4.0·10-31.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP alzheimers disease,  eye color,  neuroblastoma (brain cancer),  sporadic creutzfeldt-jakob disease,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Lung,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Whole_Blood

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