rs6000907 chr22:37849255 C>G
- Sequence
atccgcccgcctcggcctcccaaa[C/G]tggtggggttacaggtgtgagcca
- ASB in cell types
- primary B-CLL cells 22RV1 (prostate carcinoma) monocytes from periferal blood
- ASB for transcription factors
- BRD4_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 1.97 | n/a | 1.50 | n/a | n/a | |||
| ANDR_HUMAN | 2.89 | -5.22 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood