rs6001253 chr22:38836903 C>A

Sequence
atctcagctcactgcaacctcagc[C/A]tcccaggttcaagcgattctcctg
ASB for transcription factors
ZN770_HUMAN
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Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN770_HUMAN 3.23 n/a 3.2·10-31.00 2.00 -5.04 Concordant
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Motif analysis

ZN770_HUMAN Concordant
ZN770_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Artery_Tibial,  Brain_Cerebellum,  Brain_Cortex,  Brain_Nucleus_accumbens_basal_ganglia,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Esophagus_Mucosa,  Nerve_Tibial,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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