rs6001344 chr22:38967825 A>G

Sequence
actccacagcatccctgtagggct[A/G]ttgtcagagcagggaaatcaaaac
ASB in cell types
CD14+ monocytes macrophages
ASB for transcription factors
STAT1_HUMAN CEBPB_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN n/a 3.26 1.005.5·10-4 3.00 n/a No Hit
CEBPB_HUMAN n/a 2.12 1.000.04 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta,  Artery_Tibial,  Colon_Sigmoid,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Stomach

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