rs6003410 chr22:22955141 G>A
- Sequence
tgtgtgtatatatgtatatgtatc[G/A]ctacatatatatactatatataca
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) GM19239 (male B-cells lymphoblastoid cell line) GM17942 (lymphoblastoid cell)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.49 | 3.30 | 1.11 | n/a | No Hit | |||
| STAG1_HUMAN | 0.15 | 2.14 | 1.00 | n/a | n/a |
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