rs6003913 chr22:23844436 T>C
- Sequence
tgacacatagtgccttttgggccc[T/C]gagcacttgtccattgggggacct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MM1.S (plasma cell myeloma)
- ASB for transcription factors
- BRD4_HUMAN P66B_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 2.12 | n/a | 1.00 | n/a | n/a | |||
| P66B_HUMAN | 2.74 | n/a | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | -0.21 | 1.18 | 1.05 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Muscle_Skeletal, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood