ADASTRA v5.1.3
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rs6005221
chr22:26883786
T
>
C
Sequence
cgtgtttaatggaactcttgaaat[T/C]atagcctctccaaatctcctcagt
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
PRDM4_HUMAN
PRDM6_HUMAN
ZN580_HUMAN
ZN843_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRDM4_HUMAN
2.31
n/a
4.8·10
-4
1.00
2.00
n/a
n/a
PRDM6_HUMAN
3.16
n/a
2.9·10
-3
1.00
2.00
n/a
No Hit
ZN580_HUMAN
3.40
n/a
3.3·10
-3
1.00
2.00
n/a
n/a
ZN843_HUMAN
2.72
-4.72
0.01
1.00
1.50
n/a
n/a
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GRASP
age at death with kuru exposure
,
aortic valve calcium
,
hdl cholesterol
,
infant head circumference
,
ldl cholesterol
,
total cholesterol
GTEx eQTL
Adipose_Subcutaneous
,
Breast_Mammary_Tissue
,
Colon_Sigmoid
,
Heart_Left_Ventricle
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)