rs60069466 chr20:48920452 G>A
- Sequence
gtgacaggagggtcatatggatgt[G/A]tgtatcttgccagtggctgtggtg
- ASB in cell types
- liver breast tumor
- ASB for transcription factors
- RXRA_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RXRA_HUMAN | 1.98 | -3.41 | 1.50 | n/a | No Hit | |||
| ESR1_HUMAN | 3.04 | -0.80 | 1.75 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Liver, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid