rs6011701 chr20:63251537 T>C
- Sequence
aacgggcgtcttcccagacgctgg[T/C]gtcaccgctagaccaaggagccct
- ASB in cell types
- HUES64 (embryonic stem cells) GM17942 (lymphoblastoid cell) GM19099 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- RAD21_HUMAN ATF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 3.17 | -2.85 | 1.00 | n/a | n/a | |||
| ATF3_HUMAN | -2.21 | 3.00 | 2.00 | 5.55 | Concordant |
Items per page:
1 – 2 of 2
Motif analysis
