rs6012009 chr20:46689047 C>G

Sequence
cagaaggagaaactgagggaaatc[C/G]agcttcggagcgcaggggagtccc
ASB in cell types
breast tumor HEK293 (embryonic kidney)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
breast tumor 2.67 n/a 7.3·10-31.00 2.00
HEK293 (embryonic kidney) 0.03 0.69 1.001.0·10-2 2.02
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Motif analysis

No data available

Genetic associations

GRASP irritible bowel syndrome total cholesterol triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous Cells_Cultured_fibroblasts Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Whole_Blood

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