rs6012791 chr20:49987436 A>C

Sequence
aggctttggggtcctgccagggga[A/C]cctgaacatgctacttctgggcct
ASB in cell types
HT1080 (fibrosarcoma) K562 (myelogenous leukemia)
ASB for transcription factors
SSRP1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SSRP1_HUMAN 2.38 -0.95 0.011.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp),  height,  systolic blood pressure (sbp),  triglycerides change with statins
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Pancreas,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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