rs6012946 chr20:50478480 C>T
- Sequence
gggtgtgggactctggccacgcag[C/T]gtctaggcgtgaatgtttacagct
- ASB in cell types
- K562 (myelogenous leukemia) THP-1 (acute monocytic leukemia) LNCaP (prostate carcinoma) HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- C2D1A_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| C2D1A_HUMAN | -5.22 | 3.04 | 2.00 | n/a | n/a | |||
| SPI1_HUMAN | 0.48 | 1.41 | 1.56 | n/a | No Hit |
Items per page:
1 – 2 of 2