rs6016501 chr20:41012239 C>T

Sequence
ttaataataacagtattgataata[C/T]cgtaggaagaagcttctgcttctg
ASB for transcription factors
CBP_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CBP_HUMAN 0.14 2.45 1.000.02 2.00 n/a n/a
STAG1_HUMAN 1.60 -0.53 0.041.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

EMBL-EBI cholesterol, total
GRASP body mass index (bmi) cystatin c in serum infant head circumference ldl cholesterol mitral annular calcium serum creatinine total cholesterol
GTEx eQTL Adipose_Visceral_Omentum Artery_Aorta

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