rs6017995 chr20:46708399 A>G

Sequence
tttgcctgagtgagcattagtggc[A/G]gtgtccccagcctacccctttcct
ASB in cell types
pancreas 22RV1 (prostate carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
pancreas 2.28 -1.98 0.011.00 1.00
22RV1 (prostate carcinoma) 2.48 n/a 0.051.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP irritible bowel syndrome total cholesterol triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous Cells_Cultured_fibroblasts Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Whole_Blood

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