rs6020661 chr20:50642215 G>T

Sequence
tctcctcttctgggaattttcagt[G/T]cctattcctttgtccagttatctg
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells) K562 (myelogenous leukemia)
ASB for transcription factors
IKZF1_HUMAN TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 1.93 n/a 4.9·10-51.00 2.00 n/a No Hit
TF65_HUMAN 2.54 n/a 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight cystatin c in serum hdl cholesterol
GTEx eQTL Esophagus_Muscularis Nerve_Tibial Pancreas Thyroid

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