rs6020750 chr20:50793564 G>T
- Sequence
tgcagtggtgcgatcataactcgc[G/T]gtagccttgaactcctggcctcaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- OSR2_HUMAN STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| OSR2_HUMAN | 3.12 | n/a | 2.00 | n/a | No Hit | |||
| STAG1_HUMAN | 0.41 | 1.16 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.59 | 0.95 | 1.30 | n/a | No Hit |
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