rs6021329 chr20:51624524 C>T
- Sequence
acagtgtgatggcgctgacggtca[C/T]tctgctgggtggtcactcactcac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia) GBM39 (Human brain tumor)
- ASB for transcription factors
- REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | 2.11 | n/a | 2.00 | -2.61 | Concordant |
Items per page:
1 – 1 of 1
Motif analysis
