rs6022640 chr20:53656597 C>T

Sequence
agctttgctggaggaataggcctg[C/T]tgtactttttggaatttcctcagc
ASB in cell types
22RV1 (prostate carcinoma) breast tumor
ASB for transcription factors
ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 2.21 -1.25 0.051.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP age at death with kuru exposure,  diastolic blood pressure (dbp),  hdl cholesterol,  microalbuminuria,  paternal transmission distortion,  prop taste detection threshold,  refractive error,  transmission distortion,  waist hip ratio
GTEx eQTL Muscle_Skeletal

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