rs6022698 chr20:53730414 C>G
- Sequence
actcttcttatagttataatgatt[C/G]cgtgaaataggtcctactacctcc
- ASB for transcription factors
- IKZF2_HUMAN NFXL1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 1.73 | -1.13 | 1.00 | n/a | n/a | |||
| NFXL1_HUMAN | 2.85 | n/a | 3.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, serum calcium, total cholesterol