rs6023003 chr20:54183543 A>G
- Sequence
ttctgttttgctcttaagctccca[A/G]tatctggacactgttatggatatc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- P53_HUMAN HES1_HUMAN ZBT40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| P53_HUMAN | n/a | 3.60 | 4.00 | n/a | No Hit | |||
| HES1_HUMAN | n/a | 3.20 | 6.00 | n/a | n/a | |||
| ZBT40_HUMAN | 0.37 | 2.63 | 3.50 | n/a | n/a |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Esophagus_Mucosa