ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs6023012
chr20:54190034
A
>
G
Sequence
ctggttgtcaaaatccttatttaa[A/G]tctttaaggagaaaagcaatggtt
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma)
-1.83
1.71
1.00
1.8·10
-3
5.60
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
college completion
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Brain_Anterior_cingulate_cortex_BA24
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Brain_Nucleus_accumbens_basal_ganglia
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale