rs6025380 chr20:57117513 T>C
- Sequence
ttccctcaagccctgtgcctggga[T/C]tggggatggtggctctgcagaagg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- RAD51_HUMAN ARI1A_HUMAN SNIP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD51_HUMAN | 3.01 | -2.70 | 1.00 | n/a | n/a | |||
| ARI1A_HUMAN | n/a | 3.12 | 3.00 | n/a | n/a | |||
| SNIP1_HUMAN | n/a | 3.36 | 3.00 | n/a | n/a |
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