rs6025415 chr20:57169331 G>C

Sequence
gttttctttacagatgcagaaaac[G/C]tttgcagacagtctagccctcccc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
SNIP1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNIP1_HUMAN n/a 3.38 1.005.4·10-3 3.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp) obesity with early age of onset (age >2) systolic blood pressure (sbp)
GTEx eQTL Brain_Cerebellum Brain_Cortex Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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