rs6025648 chr20:57588083 A>G
- Sequence
aagtaatttatcctggaattcctt[A/G]caaccacaaacaattgaccctgag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- COT1_HUMAN NCOR1_HUMAN HDAC2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | -5.54 | 3.21 | 2.00 | n/a | No Hit | |||
| NCOR1_HUMAN | -0.70 | 2.31 | 2.00 | n/a | n/a | |||
| HDAC2_HUMAN | n/a | 2.94 | 2.00 | n/a | n/a |
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