rs6035468 chr20:19890942 T>G

Sequence
gactggtggatacagcaagactag[T/G]atattgaagtggctcttgacaagt
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.13 -0.02 1.5·10-61.00 1.38 n/a No Hit
ANDR_HUMAN 1.84 -0.01 6.3·10-51.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP refractive error
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Breast_Mammary_Tissue Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Lung Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg Stomach Thyroid

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