rs6036200 chr20:22735243 A>G
- Sequence
cagggcagagccaaacaaaaggca[A/G]cagaaacctctgcagacttaaacg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HeLa S3 (cervical adenocarcinoma) MCF7L-P(immortalized breast epithelial cell line) MOLM-13(acute monocytic leukemia(AML), Homo sapiens)
- ASB for transcription factors
- CTCF_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.41 | 0.85 | 1.29 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.98 | -0.30 | 1.30 | n/a | No Hit |
Items per page:
1 – 2 of 2