rs6037767 chr20:4119674 T>C

Sequence
ttctgacttgagcaactggattga[T/C]gtgagtgccttcagtgagtcagat
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney) HeLa S3 (cervical adenocarcinoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
TTC-1240 (Rhabdoid tumor of the kidney) 1.31 -0.20 0.011.00 1.21
HeLa S3 (cervical adenocarcinoma) -0.54 1.68 1.000.03 1.60
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Motif analysis

No data available

Genetic associations

GRASP alcohol dependence alcohol dependence (early age of onset) comorbid depressive syndrome and alcohol dependence hypertension (early onset hypertension)
GTEx eQTL Adipose_Visceral_Omentum Cells_Cultured_fibroblasts

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