rs6037977 chr20:4822794 G>C
- Sequence
ccctctgaagcgcgccgcctcccc[G/C]cgccggggactgggacctgcctct
- ASB in cell types
- primary B-CLL cells germinal center B-cells HEK293 (embryonic kidney) CD14+ monocytes
- ASB for transcription factors
- CBP_HUMAN BRD4_HUMAN CTCF_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CBP_HUMAN | 3.19 | n/a | 2.00 | n/a | n/a | |||
| BRD4_HUMAN | 2.77 | 0.55 | 1.50 | n/a | n/a | |||
| CTCF_HUMAN | 1.30 | 0.21 | 1.25 | 4.75 | Discordant | |||
| STAT1_HUMAN | 1.64 | -0.83 | 3.00 | n/a | No Hit |
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Motif analysis
