rs6039769 chr20:10218306 A>C
- Sequence
gcgagggtggacggggatgcccct[A/C]cggaccctcttcggagaaaacaaa
- ASB in cell types
- CRC107 (colorectal cancer metastatic stem cells)
- ASB for transcription factors
- REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | 0.47 | 2.29 | 1.83 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP acute lung injury following major trauma, epilepsy, etoposide-induced neutropenia/leukopenia in cancer patients, fasting blood glucose, fasting insulin, homa-b, homa-ir, microalbuminuria, refractive error, salmonella-induced pyroptosis, spine bone mineral density (bmd)