rs6039932 chr20:10434849 T>C

Sequence
gttatgttcaaacatggctatttt[T/C]attaaaatttatccggcactgtga
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) MOLM14 (Adult acute myeloid leukemia)
ASB for transcription factors
FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 2.89 1.32 1.4·10-31.00 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence infant head circumference
GTEx eQTL Adipose_Subcutaneous Artery_Aorta Artery_Tibial Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Lung Nerve_Tibial Spleen Whole_Blood

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