rs6040194 chr20:10849331 G>T
- Sequence
aggtcttaccacacgctgcatttg[G/T]ctaagtgtagacagatggacagat
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- TCF21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 1.52 | n/a | 2.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, autism, bipolar disorder, change in depression severity with antidepressants (nri or sri), comorbid depressive syndrome and alcohol dependence, ldl cholesterol, partial epilepsy, sporadic creutzfeldt-jakob disease