rs6040435 chr20:11219325 A>G

Sequence
ttacctcaagattttactatgtct[A/G]tgaaccacatatagaatcacttac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
FOXK2_HUMAN SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 2.59 -2.46 6.8·10-31.00 1.00 n/a n/a
SPI1_HUMAN 1.19 -0.18 0.031.00 2.22 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP adiponectin levels asthma bipolar disorder body mass index (bmi) college completion homa-b lp-pla2 mass tetrology of fallot
GTEx eQTL Lung Ovary

Download