rs6042360 chr20:13784861 C>T
- Sequence
cccttcatctcgagctcttcaact[C/T]cagtccatccccactcaccgtccg
- ASB in cell types
- adult erythroblasts breast tumor CD14+ monocytes 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ESR1_HUMAN STAT1_HUMAN KDM6A_HUMAN RBBP5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.72 | -0.25 | 1.62 | n/a | No Hit | |||
| STAT1_HUMAN | 2.88 | n/a | 3.00 | n/a | No Hit | |||
| KDM6A_HUMAN | 2.84 | n/a | 2.00 | n/a | n/a | |||
| RBBP5_HUMAN | 1.84 | n/a | 2.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.50 | -5.17 | 2.00 | n/a | No Hit |
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