rs6045698 chr20:1965583 A>C
- Sequence
gttccgatgagagctggggcaaac[A/C]ggatttccctttctttgcagtgag
- ASB in cell types
- foreskin keratinocyte GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN ELF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.94 | 0.51 | 1.26 | n/a | No Hit | |||
| ELF1_HUMAN | -1.16 | 1.85 | 1.17 | n/a | No Hit |
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