rs6047451 chr20:2218253 A>C

Sequence
ctacctgagactgggtgatttatg[A/C]agaagagaggtttagttgactctc
ASB in cell types
MDM(monocyte derived macrophages) monocytes from periferal blood
ASB for transcription factors
SPI1_HUMAN SRBP2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 1.54 -0.07 0.011.00 2.26 -1.97 Weak Concordant
SRBP2_HUMAN 2.50 n/a 0.031.00 3.00 n/a No Hit
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Motif analysis

SPI1_HUMAN Weak Concordant
SPI1_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd localized aggressive periodontitis obesity with early age of onset (age >2) prostate cancer mortality

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