rs6048493 chr20:22999990 A>G

Sequence
atgattcagctcaacagccgctca[A/G]acatttacttggtgtggactgtgt
ASB in cell types
VCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.83 -0.40 0.041.00 2.00 n/a No Hit
FOXA1_HUMAN 1.46 -0.20 0.051.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight college completion fasting insulin mitral annular calcium

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