rs6048794 chr20:23421515 C>T

Sequence
aggcgcaggcgcgacgcgcgaggc[C/T]tttcgggagctgtagtccgggtcc
ASB in cell types
adult erythroblasts CD14+ monocytes
ASB for transcription factors
HCFC1_HUMAN STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HCFC1_HUMAN 1.87 n/a 2.4·10-201.00 2.00 n/a n/a
STAT1_HUMAN 2.62 n/a 0.021.00 4.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa

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