rs6051788 chr20:3358798 T>C

Sequence
tcctcactaattgtactgaagctc[T/C]ttggtgaaatggctaattctaagt
ASB in cell types
liver GM19239 (male B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
liver 1.59 -1.07 0.021.00 1.00
GM19239 (male B-cells lymphoblastoid cell line) 1.56 -0.90 0.051.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol change with statins rheumatoid arthritis
GTEx eQTL Adipose_Visceral_Omentum Artery_Tibial Brain_Cerebellum Lung Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Stomach Thyroid Whole_Blood

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