rs6052384 chr20:4129471 C>G
- Sequence
tgctggattacagggatgagtcac[C/G]gtgcctgacctagacacggccttt
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) Th1-cells MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- JUND_HUMAN TBX21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUND_HUMAN | 1.86 | -3.13 | 1.50 | -3.32 | Concordant | |||
| TBX21_HUMAN | 2.17 | -2.16 | 1.00 | n/a | No Hit |
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Motif analysis
