rs6052988 chr20:4961954 T>C
- Sequence
agcctctgtgggtagagatgtacg[T/C]agacagttgcccttatgcaaggca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- CREB1_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 1.22 | -0.23 | 1.36 | n/a | No Hit | |||
| IKZF1_HUMAN | -0.07 | 2.03 | 1.17 | n/a | No Hit |
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