rs6053267 chr20:5297529 C>T
- Sequence
tataaccagatgtactcttgcacc[C/T]aagctttgatgtgattgtacacgt
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- MNT_HUMAN SP130_HUMAN ARI4B_HUMAN MIXL1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | 1.64 | -0.82 | 1.00 | n/a | n/a | |||
| SP130_HUMAN | 2.07 | -3.28 | 1.33 | n/a | n/a | |||
| ARI4B_HUMAN | 1.75 | -1.57 | 1.00 | n/a | n/a | |||
| MIXL1_HUMAN | 2.46 | -2.49 | 1.00 | n/a | n/a | |||
| TGIF2_HUMAN | 2.27 | -1.79 | 1.00 | n/a | n/a |
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