rs6056178 chr20:953857 G>T
- Sequence
ttttttatggctcttagccaatca[G/T]ataggtggaaaatggtagctctgt
- ASB in cell types
- foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.14 | 0.58 | 1.55 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, hdl cholesterol, ldl cholesterol, prop taste detection threshold, total cholesterol