rs605686 chr6:137799008 G>A

Sequence
aaaaaccacaaaaatgaaaacatg[G/A]gcaactaaggaggcagaaggactt
ASB in cell types
MS-1 (Small cell lung carcinoma)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.83 4.72 0.513.4·10-16 1.00 n/a No Hit
STAG1_HUMAN -3.61 3.29 1.003.1·10-5 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol rheumatoid arthritis

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