rs6061115 chr20:32034915 A>C
- Sequence
ttcctgacatcacaagaggggaaa[A/C]ccccctaggggtgggatagctggt
- ASB in cell types
- CD14+ monocytes monocyte-derived macrophages from peripheral blood HUVEC-C (HUVEC, umbilical vein endothelial cells) FaDu(Hypopharyngeal squamous cell carcinoma)
- ASB for transcription factors
- TF65_HUMAN STAT1_HUMAN STAT3_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.54 | -4.89 | 2.75 | -1.02 | Weak Concordant | |||
| STAT1_HUMAN | 2.23 | 0.31 | 2.00 | n/a | No Hit | |||
| STAT3_HUMAN | 2.46 | 0.04 | 2.00 | n/a | No Hit |
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Motif analysis
