rs6061501 chr20:62378340 T>C
- Sequence
gctttcaagcaaaacacagcctcg[T/C]ctctgggcctgtttctgccgtgcg
- ASB in cell types
- T47D (invasive ductal carcinoma)
- ASB for transcription factors
- HIF1A_HUMAN KMT2D_HUMAN HIF3A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HIF1A_HUMAN | -4.07 | 2.52 | 1.50 | n/a | No Hit | |||
| KMT2D_HUMAN | -0.28 | 1.52 | 1.00 | n/a | n/a | |||
| HIF3A_HUMAN | -4.24 | 2.44 | 1.50 | n/a | n/a |
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