rs6062357 chr20:64261386 C>T
- Sequence
tcctgttagaactgacaggattta[C/T]gggtggactgtatatgcttgtgaa
- ASB in cell types
- CLB-Ga (neuroblastoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| CLB-Ga (neuroblastoma) | -1.94 | 2.89 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP autism, autism with verbal ability, resistance to kuru in aged women despite likely exposure, sporadic creutzfeldt-jakob disease, tetrology of fallot
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Breast_Mammary_Tissue, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Whole_Blood