rs6062732 chr20:62874398 C>T

Sequence
cagccagacattcggagccactac[C/T]ggtctctgcgcattggtggtagtg
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
TBP_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBP_HUMAN 1.75 -0.07 0.011.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
GTEx eQTL Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Hippocampus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Brain_Spinal_cord_cervical_c-1 Nerve_Tibial Thyroid

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