rs6063514 chr20:50438781 C>T

Sequence
aaaaattagccgtgcttggtggtg[C/T]gcacctgtaatgacagctactagc
ASB in cell types
keratinocytes
ASB for transcription factors
SNAI2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN 1.38 -0.92 0.041.00 1.50 0.67 Weak Discordant
Items per page:
1 – 1 of 1

Motif analysis

SNAI2_HUMAN Weak Discordant
SNAI2_HUMAN pic

Genetic associations

EMBL-EBI colorectal cancer or advanced adenoma intraocular pressure
GTEx eQTL Brain_Hippocampus Testis

Download