rs6063515 chr20:50440368 G>A

Sequence
aaccctgtctctactaaaaacaca[G/A]aaatttgctgggcgtggtggcatg
ASB in cell types
keratinocytes
ASB for transcription factors
SNAI2_HUMAN BRD4_HUMAN RARA_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN 1.69 -0.77 7.5·10-61.00 1.50 n/a No Hit
BRD4_HUMAN 1.65 -0.94 0.031.00 1.00 n/a n/a
RARA_HUMAN 1.76 -3.14 0.041.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Hippocampus Testis

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