rs6063600 chr20:51127199 A>C
- Sequence
gcagtgcagctcttgttgattttg[A/C]agagctgctgatcgccttgtttga
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.18 | 1.32 | 2.04 | 1.02 | Weak Concordant |
Items per page:
1 – 1 of 1
Motif analysis
